New South Wales outbreak paths update for 3 July 2021: Inspired by the very informative work of @dbRaevn, a dataviz of the paths of infection, for the current COVID-19 outbreak. Interactive dataviz, data and source code available here: github.com/Mike-Honey/covid-…
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Replying to @Mike_Honey_
Thanks @Mike_Honey_ and @dbRaevn you've visualised the outbreak nicely. Outbreak management looks now at critical issue of % cases not in isolation. Visualising this would be helpful as I'd like to show it at a data conference - giving all credit to both of you

Jul 4, 2021 · 12:12 AM UTC

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Replying to @MarylouiseMcla1 @Mike_Honey_
Unfortunately except when specific cases are called out, we only get told the sum total of cases in a day that were isolating, not which cases, so I can't indicate them on the map. However, @juliette_io does chart these numbers over time to see the trend:
Juliette O'Brien
 @juliette_io
3 Jul 2021
Seems green was the right colour for this chart Gladys says more cases in quarantine / isolation during infectious period show there are 'green shoots' in controlling outbreak🌱 Saturday: (+35) 🏠Yes: 23 🐦No: 9 🏃‍♂️In part: 3 #covid19aus #covidnsw #covid19nsw #COVID19Vic
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thanks I've been following this purple group since the beginning as its critical. I have your link and @Mike_Honey_ and will show this to the conference on how outbreak epi has advanced from 'line list' and 'spot maps' 😆
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Replying to @MarylouiseMcla1 @dbRaevn
Thanks for the feedback Mary-Louise - I'm very encouraged as it can be a dispiriting task at times. All my volunteer projects are open source, so happy for you to share them or use them however they are useful.
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Replying to @MarylouiseMcla1 @Mike_Honey_ @dbRaevn
Covif fragments now in many Sydney catchments, including many with no cases. Dr Chant signalled today that sewage data was important.
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Replying to @MarylouiseMcla1 @Mike_Honey_ @dbRaevn
@juliette_io has a great graph on this
Juliette O'Brien
 @juliette_io
3 Jul 2021
By request - line chart of NSW daily cases not in quarantine / isolation for full infectious period #covidnsw #covidsydney #covid19nsw #COVID19Aus
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